Pressure-Consistent Iterative Boltzmann Inversion for Coarse-Grained Molecular Dynamics

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Abstract

Bottom-up coarse-graining enables efficient simulation of complex molecular systems on mesoscopic scales. Many methods capture structural features well but often overestimate pressure, as computed by the virial theorem, due to thermodynamic representability issues. This limits utility, particularly for studying phenomena using the isothermal–isobaric (NPT) ensemble. Here, we present and analyze straightforward extensions of iterative Boltzmann inversion (IBI) that include pressure corrections during parameter optimization. Two new approaches are explored: iterative range transformation (iRT) and iterative linear correction (iLC). These approaches differ from the more common practice of adding long-range attractive forces only after CG potential optimization. Performance is evaluated across diverse molecular systems, including polymer melts and molecular liquids, at varying CG resolutions. Both methods retain structural fidelity while enhancing thermodynamic consistency through reasonable modifications of the pair potential. In particular, the resulting CG models accurately reproduce radial distribution functions, densities, and density fluctuations, with iRT exhibiting improved stability and faster convergence. Analysis of isothermal compressibility reveals a general resolution-dependent trend with significant deviation from atomistic behavior emerging below a critical CG resolution. State-point tests show that pressure transferability is resolution-dependent, whereas temperature transferability is largely resolution-independent. These findings demonstrate that iRT and iLC are practical, transferable methods for constructing coarse-grained models with a consistent thermodynamic behavior. They also provide insights into limits of fidelity based on the resolution of the CG models.

Original languageEnglish (US)
Pages (from-to)10424-10436
Number of pages13
JournalJournal of Chemical Theory and Computation
Volume21
Issue number20
DOIs
StatePublished - Oct 28 2025

All Science Journal Classification (ASJC) codes

  • Computer Science Applications
  • Physical and Theoretical Chemistry

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