Portinari: A data exploration tool to personalize cervical cancer screening

Sagar Sen, Manoel Horta Ribeiro, Racquel C. De Melo Minardi, Wagner Meira, Mari Nygard

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Abstract

Socio-technical systems play an important role inpublic health screening programs to prevent cancer. Cervicalcancer incidence has significantly decreased in countries thatdeveloped systems for organized screening engaging medicalpractitioners, laboratories and patients. The system automaticallyidentifies individuals at risk of developing the disease and invitesthem for a screening exam or a follow-up exam conducted bymedical professionals. A triage algorithm in the system aims toreduce unnecessary screening exams for individuals at low-riskwhile detecting and treating individuals at high-risk. Despite thegeneral success of screening, the triage algorithm is a one-sizefitsall approach that is not personalized to a patient. This caneasily be observed in historical data from screening exams. Oftenpatients rely on personal factors to determine that they are eitherat high risk or not at risk at all and take action at their owndiscretion. Can exploring patient trajectories help hypothesizepersonal factors leading to their decisions? We present Portinari, a data exploration tool to query and visualize future trajectoriesof patients who have undergone a specific sequence of screeningexams. The web-based tool contains (a) a visual query interface(b) a backend graph database of events in patients' lives (c)trajectory visualization using sankey diagrams. We use Portinarito explore diverse trajectories of patients following the Norwegiantriage algorithm. The trajectories demonstrated variable degreesof adherence to the triage algorithm and allowed epidemiologiststo hypothesize about the possible causes.

Original languageEnglish (US)
Title of host publicationProceedings - 2017 IEEE/ACM 39th International Conference on Software Engineering
Subtitle of host publicationSoftware Engineering in Society Track, ICSE-SEIS 2017
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages37-46
Number of pages10
ISBN (Electronic)9781538626733
DOIs
StatePublished - Jun 28 2017
Externally publishedYes
Event39th IEEE/ACM International Conference on Software Engineering: Software Engineering in Society Track, ICSE-SEIS 2017 - Buenos Aires, Argentina
Duration: May 20 2017May 28 2017

Publication series

NameProceedings - 2017 IEEE/ACM 39th International Conference on Software Engineering: Software Engineering in Society Track, ICSE-SEIS 2017

Conference

Conference39th IEEE/ACM International Conference on Software Engineering: Software Engineering in Society Track, ICSE-SEIS 2017
Country/TerritoryArgentina
CityBuenos Aires
Period5/20/175/28/17

All Science Journal Classification (ASJC) codes

  • Software
  • Linguistics and Language

Keywords

  • cervical cancer screening
  • data exploration
  • graph databases
  • interactive visualization
  • knowledge discovery
  • Portinari
  • socio-technical system

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