Learning a hidden matching

Noga Alon, Richard Beigel, Simon Kasif, Steven Rudich, Benny Sudakovh

Research output: Contribution to journalArticlepeer-review

57 Scopus citations

Abstract

We consider the problem of learning a matching (i.e., a graph in which all vertices have degree 0 or 1) in a model where the only allowed operation is to query whether a set of vertices induces an edge. This is motivated by a problem that arises in molecular biology. In the deterministic nonadaptive setting, we prove a (1/2 + o(1))( n 2) upper bound and a nearly matching 0.32 ( n 2) lower bound for the minimum possible number of queries. In contrast, if we allow randomness, then we obtain (by a randomized, nonadaptive algorithm) a much lower O(n log n) upper bound, which is best possible (even for randomized fully adaptive algorithms).

Original languageEnglish (US)
Pages (from-to)487-501
Number of pages15
JournalSIAM Journal on Computing
Volume33
Issue number2
DOIs
StatePublished - Jan 2004
Externally publishedYes

All Science Journal Classification (ASJC) codes

  • General Computer Science
  • General Mathematics

Keywords

  • Combinatorial search problems
  • Finite protective planes
  • Genome sequencing
  • Matchings in graphs

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