TY - JOUR
T1 - Genome mining for lasso peptides
T2 - past, present, and future
AU - Cheung-Lee, Wai Ling
AU - Link, A. James
N1 - Publisher Copyright:
© 2019, Society for Industrial Microbiology and Biotechnology.
PY - 2019/10/1
Y1 - 2019/10/1
N2 - Over the course of roughly a decade, the lasso peptide field has been transformed. Whereas new compounds were discovered infrequently via activity-driven approaches, now, the vast majority of lasso peptide discovery is driven by genome-mining approaches. This paper starts with a historical overview of the first genome-mining approaches for lasso peptide discovery, and then covers new tools that have emerged. Several examples of novel lasso peptides that have been discovered via genome mining are presented as are examples of new enzymes found associated with lasso peptide gene clusters. Finally, this paper concludes with future directions and unsolved challenges in lasso peptide genome mining.
AB - Over the course of roughly a decade, the lasso peptide field has been transformed. Whereas new compounds were discovered infrequently via activity-driven approaches, now, the vast majority of lasso peptide discovery is driven by genome-mining approaches. This paper starts with a historical overview of the first genome-mining approaches for lasso peptide discovery, and then covers new tools that have emerged. Several examples of novel lasso peptides that have been discovered via genome mining are presented as are examples of new enzymes found associated with lasso peptide gene clusters. Finally, this paper concludes with future directions and unsolved challenges in lasso peptide genome mining.
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U2 - 10.1007/s10295-019-02197-z
DO - 10.1007/s10295-019-02197-z
M3 - Article
C2 - 31165971
AN - SCOPUS:85067000002
SN - 1367-5435
VL - 46
SP - 1371
EP - 1379
JO - Journal of Industrial Microbiology and Biotechnology
JF - Journal of Industrial Microbiology and Biotechnology
IS - 9-10
ER -