Abstract
α-Sarcin and ricin represent two structurally and mechanistically distinct families of site-specific enzymes that block translation by irreversibly modifying the sarcin/ricin loop (SRL) of 23S-28S rRNA. α-Sarcin family enzymes are designated as ribotoxins and act as endonucleases. Ricin family enzymes are designated as ribosome inactivating proteins (RIP) and act as N-glycosidases. Recently, we demonstrated that basic surface residues of the ribotoxin restrictocin promote rapid and specific ribosome targeting by this endonuclease. Here, we report that three RIP: ricin A, saporin, and gypsophilin depurinate the ribosome with strong salt sensitivity and achieve unusually fast kcat/Km ∼10 9-1010 M-1s-1, implying that RIP share with ribotoxins a common mechanism of electrostatically facilitated ribosome targeting. Bioinformatics analysis of RIP revealed that surface charge properties correlate with the presence of the transport chain in the RIP molecule, suggesting a second role for the surface charge in RIP transport. These findings put forward surface electrostatics as an important determinant of RIP activity. Published by Cold Spring Harbor Laboratory Press.
| Original language | English (US) |
|---|---|
| Pages (from-to) | 1391-1396 |
| Number of pages | 6 |
| Journal | RNA |
| Volume | 13 |
| Issue number | 9 |
| DOIs | |
| State | Published - Sep 2007 |
| Externally published | Yes |
All Science Journal Classification (ASJC) codes
- Molecular Biology
Keywords
- Electrostatic
- Kinetics
- Mechanism
- Ribosome
- Ribotoxin
- Smoluchowski
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