Epistasis and evolution: recent advances and an outlook for prediction

Milo S. Johnson, Gautam Reddy, Michael M. Desai

Research output: Contribution to journalReview articlepeer-review

36 Scopus citations

Abstract

As organisms evolve, the effects of mutations change as a result of epistatic interactions with other mutations accumulated along the line of descent. This can lead to shifts in adaptability or robustness that ultimately shape subsequent evolution. Here, we review recent advances in measuring, modeling, and predicting epistasis along evolutionary trajectories, both in microbial cells and single proteins. We focus on simple patterns of global epistasis that emerge in this data, in which the effects of mutations can be predicted by a small number of variables. The emergence of these patterns offers promise for efforts to model epistasis and predict evolution.

Original languageEnglish (US)
Article number120
JournalBMC Biology
Volume21
Issue number1
DOIs
StatePublished - Dec 2023
Externally publishedYes

All Science Journal Classification (ASJC) codes

  • Biotechnology
  • Structural Biology
  • Ecology, Evolution, Behavior and Systematics
  • Physiology
  • General Biochemistry, Genetics and Molecular Biology
  • General Agricultural and Biological Sciences
  • Plant Science
  • Developmental Biology
  • Cell Biology

Keywords

  • Adaptability
  • Evolvability
  • Macroscopic epistasis
  • Microscopic epistasis
  • Robustness

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