Find Research Outputs

2020

Generation of Large Fragment Knock-In Mouse Models by Microinjecting into 2-Cell Stage Embryos

Gu, B., Gertsenstein, M. & Posfai, E., Jan 1 2020, Methods in Molecular Biology. Humana Press Inc., p. 89-100 12 p. (Methods in Molecular Biology; vol. 2066).

Research output: Chapter in Book/Report/Conference proceedingChapter

Clustered Regularly Interspaced Short Palindromic Repeats
Embryonic Structures
Homologous Recombination
Biological Models
Translational Medical Research

Microbial vanadate and nitrate reductions coupled with anaerobic methane oxidation in groundwater

Zhang, B., Jiang, Y., Zuo, K., He, C., Dai, Y. & Ren, Z., Jan 15 2020, In : Journal of Hazardous Materials. 382, 121228.

Research output: Contribution to journalArticle

Vanadates
Groundwater
Methane
Nitrates
methane

Photocurrent deviation from linearity in an organic photodetector due to limited hole transport layer conductivity

Euvrard, J., Revaux, A., Kahn, A. & Vuillaume, D., Jan 1 2020, In : Organic Electronics. 76, 105450.

Research output: Contribution to journalArticle

Photodetectors
Photocurrents
linearity
photocurrents
photometers

PZnet: Efficient 3D ConvNet Inference on Manycore CPUs

Popovych, S., Buniatyan, D., Zlateski, A., Li, K. & Seung, H. S., Jan 1 2020, Advances in Computer Vision - Proceedings of the 2019 Computer Vision Conference CVC. Kapoor, S. & Arai, K. (eds.). Springer Verlag, p. 369-383 15 p. (Advances in Intelligent Systems and Computing; vol. 943).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Program processors
Convolution
Magnetic resonance imaging
Image analysis
Microscopic examination

Secure Relaying in Non-Orthogonal Multiple Access: Trusted and Untrusted Scenarios

Arafa, A., Shin, W., Vaezi, M. & Poor, H. V., Jan 1 2020, In : IEEE Transactions on Information Forensics and Security. 15, 1, p. 210-222 13 p., 8691580.

Research output: Contribution to journalArticle

Jamming
Base stations
Beamforming

Weakly Supervised Deep Metric Learning for Template Matching

Buniatyan, D., Popovych, S., Ih, D., Macrina, T., Zung, J. & Seung, H. S., Jan 1 2020, Advances in Computer Vision - Proceedings of the 2019 Computer Vision Conference CVC. Kapoor, S. & Arai, K. (eds.). Springer Verlag, p. 39-58 20 p. (Advances in Intelligent Systems and Computing; vol. 943).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Template matching
Supervised learning
Bandpass filters
Learning algorithms
Computer vision
2019

17.3 Hybrid System for Efficient LAE-CMOS Interfacing in Large-Scale Tactile-Sensing Skins via TFT-Based Compressed Sensing

Aygun, L. E., Kumar, P., Zheng, Z., Chen, T. S., Wagner, S., Sturm, J. C. & Verma, N., Mar 6 2019, 2019 IEEE International Solid-State Circuits Conference, ISSCC 2019. Institute of Electrical and Electronics Engineers Inc., p. 280-282 3 p. 8662442. (Digest of Technical Papers - IEEE International Solid-State Circuits Conference; vol. 2019-February).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Compressed sensing
Thin film transistors
Hybrid systems
Skin
Electronic equipment

2018 Jack Kenney Award for Outstanding Service

Silhavy, T. J., Jan 1 2019, In : Journal of bacteriology. 201, 1

Research output: Contribution to journalArticle

22.8 Adaptively Clock-Boosted Auto-Ranging Responsive Neurostimulator for Emerging Neuromodulation Applications

Pazhouhandeh, M. R., Orleary, G., Weisspapir, I., Groppe, D., Nguyen, X. T., Abdelhalim, K., Jafari, H. M., Valiante, T. A., Carlen, P., Verma, N. & Genov, R., Mar 6 2019, 2019 IEEE International Solid-State Circuits Conference, ISSCC 2019. Institute of Electrical and Electronics Engineers Inc., p. 374-376 3 p. 8662458. (Digest of Technical Papers - IEEE International Solid-State Circuits Conference; vol. 2019-February).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Clocks
Brain
Data storage equipment
Electrodes
Sleep

2D Magnetic Sensor Array for Real-time Cell Tracking and Multi-site Detection with Increased Robustness and Flow-rate

Tang, H., Venkatesh, S., Lin, Z., Lu, X., Saeidi, H., Rather, G. M., Bertino, J. R., Lin, C. Y., Javanmard, M. & Sengupta, K., Apr 1 2019, 2019 IEEE Custom Integrated Circuits Conference, CICC 2019. Institute of Electrical and Electronics Engineers Inc., 8780363. (Proceedings of the Custom Integrated Circuits Conference; vol. 2019-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetic sensors
Flow cytometry
Sensor arrays
Microfluidics
Cells
2 Citations (Scopus)

3D culture models for studying branching morphogenesis in the mammary gland and mammalian lung

Nerger, B. A. & Nelson, C. M., Apr 1 2019, In : Biomaterials. 198, p. 135-145 11 p.

Research output: Contribution to journalArticle

Human Mammary Glands
Morphogenesis
Lung
Tissue
Engineers
1 Citation (Scopus)

A 64-Tile 2.4-Mb In-Memory-Computing CNN Accelerator Employing Charge-Domain Compute

Valavi, H., Ramadge, P. J., Nestler, E. & Verma, N., Jun 1 2019, In : IEEE Journal of Solid-State Circuits. 54, 6, p. 1789-1799 11 p., 8660469.

Research output: Contribution to journalArticle

Tile
Neurons
Particle accelerators
Convolution
Data storage equipment
1 Citation (Scopus)

A biased competition theory for the developmental cognitive neuroscience of visuo-spatial attention

Kim, N. Y. & Kastner, S., Oct 1 2019, In : Current Opinion in Psychology. 29, p. 219-228 10 p.

Research output: Contribution to journalReview article

Parietal Lobe
Electrophysiology
Neuroimaging
Cognitive Neuroscience
Brain

A biomimetic 3D model of hypoxia-driven cancer progression

Liverani, C., De Vita, A., Minardi, S., Kang, Y., Mercatali, L., Amadori, D., Bongiovanni, A., La Manna, F., Ibrahim, T. & Tasciotti, E., Dec 1 2019, In : Scientific reports. 9, 1, 12263.

Research output: Contribution to journalArticle

Open Access
Biomimetics
Neoplasms
Collagen
Epithelial-Mesenchymal Transition
Hypoxia
3 Citations (Scopus)

A bright future: optogenetics to dissect the spatiotemporal control of cell behavior

Goglia, A. G. & Toettcher, J. E., Feb 1 2019, In : Current Opinion in Chemical Biology. 48, p. 106-113 8 p.

Research output: Contribution to journalReview article

Optogenetics
Behavior Control
Proteins
Design of experiments
Research Design

Abundance of minimal surfaces

Coda Santos Cavalcanti Marques, F., Jan 1 2019, In : Japanese Journal of Mathematics.

Research output: Contribution to journalArticle

Minimal surface
Minimal Hypersurface
Closed
Riemannian Manifold
Existence Theory
10 Citations (Scopus)

Accelerating changes in ice mass within Greenland, and the ice sheet's sensitivity to atmospheric forcing

Bevis, M., Harig, C., Khan, S. A., Brown, A., Simons, F. J., Willis, M., Fettweis, X., Van Den Broeke, M. R., Madsen, F. B., Kendrick, E., Caccamise, D. J., Van Dam, T., Knudsen, P. & Nylen, T., Feb 5 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 6, p. 1934-1939 6 p.

Research output: Contribution to journalArticle

Greenland
Ice Cover
Ice
Climate
Geographic Information Systems

Accretion disk versus jet orientation in H2O megamaser galaxies

Kamali, F., Henkel, C., Koyama, S., Kuo, C. Y., Condon, J. J., Brunthaler, A., Reid, M. J., Greene, J. E., Menten, K. M., Impellizzeri, C. M. V., Braatz, J. A., Litzinger, E. & Kadler, M., Apr 1 2019, In : Astronomy and Astrophysics. 624, A42.

Research output: Contribution to journalArticle

Open Access
accretion disks
masers
accretion
radio
galaxies

Accurate Identification of Galaxy Mergers with Imaging

Nevin, R., Blecha, L., Comerford, J. & Greene, J. E., Feb 10 2019, In : Astrophysical Journal. 872, 1, 76.

Research output: Contribution to journalArticle

merger
galaxies
mass ratios
asymmetry
gases
1 Citation (Scopus)

A Cenozoic record of seawater uranium in fossil corals

Gothmann, A. M., Higgins, J. A., Adkins, J. F., Broecker, W., Farley, K. A., McKeon, R., Stolarski, J., Planavsky, N., Wang, X. & Bender, M. L., Apr 1 2019, In : Geochimica et Cosmochimica Acta. 250, p. 173-190 18 p.

Research output: Contribution to journalArticle

Uranium
Seawater
uranium
coral
fossil
1 Citation (Scopus)

Acid-Catalyzed Reactions Activate DMSO as a Reagent in Perovskite Precursor Inks

Hamill, J. C., Sorli, J. C., Pelczer, I., Schwartz, J. & Loo, Y. L., Mar 26 2019, In : Chemistry of Materials. 31, 6, p. 2114-2120 7 p.

Research output: Contribution to journalArticle

Dimethyl Sulfoxide
Ink
Perovskite
Proton transfer
Acids
20 Citations (Scopus)

A complete catalogue of high-quality topological materials

Vergniory, M. G., Elcoro, L., Felser, C., Regnault, N., Bernevig, B. A. & Wang, Z., Feb 28 2019, In : Nature. 566, 7745, p. 480-485 6 p.

Research output: Contribution to journalArticle

Research Personnel
Databases
Electrons

A comprehensive study of CO2 addition on soot particle formation during ethylene pyrolysis in a flow reactor

Mei, J., You, X. & Law, C. K., Jan 1 2019.

Research output: Contribution to conferencePaper

Soot
soot
pyrolysis
Ethylene
Pyrolysis

A Computational Framework for Genome-wide Characterization of the Human Disease Landscape

Lee, Y. S., Krishnan, A., Oughtred, R., Rust, J., Chang, C. S., Ryu, J., Kristensen, V. N., Dolinski, K., Theesfeld, C. L. & Troyanskaya, O. G., Feb 27 2019, In : Cell Systems. 8, 2, p. 152-162.e6

Research output: Contribution to journalArticle

Genome
Drug Repositioning
Rare Diseases
Neuroblastoma
Transcriptome

A computational investigation of the thermodynamics of the Stillinger-Weber family of models at supercooled conditions

Ricci, F., Palmer, J. C., Goswami, Y., Sastry, S., Angell, C. A. & Debenedetti, P. G., Jan 1 2019, (Accepted/In press) In : Molecular Physics.

Research output: Contribution to journalArticle

Phase Transition
Thermodynamics
Silicon
thermodynamics
Liquids
1 Citation (Scopus)

A computationally efficient turnkey approach to turbulent combustion modeling: From elusive fantasy to impending reality

Mueller, M. E., Jan 1 2019, AIAA Scitech 2019 Forum. American Institute of Aeronautics and Astronautics Inc, AIAA, (AIAA Scitech 2019 Forum).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Convolution
Compressibility
Probability density function
Costs
Turbulence

A conformally invariant gap theorem characterizing CP2 via the Ricci flow

Chang, S-Y. A., Gursky, M. & Zhang, S., Jan 1 2019, In : Mathematische Zeitschrift.

Research output: Contribution to journalArticle

Sphere Theorem
Conformal Invariants
Four-manifolds
Ricci Flow
Positivity

A contraction for sovereign debt models

Aguiar, M. A. & Amador, M., Sep 1 2019, In : Journal of Economic Theory. 183, p. 842-875 34 p.

Research output: Contribution to journalArticle

Contraction
Sovereign debt
Markov equilibrium
Reentry
Benchmark

A convergence analysis of gradient descent for deep linear neural networks

Arora, S., Golowich, N., Cohen, N. & Hu, W., Jan 1 2019.

Research output: Contribution to conferencePaper

neural network
Neural networks
regression
Neural Networks
Descent

Acoustic Pattern Recognition and Courtship Songs: Insights from Insects

Baker, C. A., Clemens, J. & Murthy, M., Jan 1 2019, In : Annual Review of Neuroscience. 42, p. 129-147 19 p.

Research output: Contribution to journalReview article

Courtship
Music
Acoustics
Insects
Gryllidae

A cryptographic escrow for treaty declarations and step-by-step verification

Philippe, S., Glaser, A. & Felten, E. W., Jan 2 2019, In : Science and Global Security. 27, 1, p. 3-14 12 p.

Research output: Contribution to journalArticle

International cooperation
Inspection
2 Citations (Scopus)

Active harvesting enhances energy recovery and function of electroactive microbiomes in microbial fuel cells

Lu, L., Lobo, F. L., Xing, D. & Ren, Z., Aug 1 2019, In : Applied Energy. 247, p. 492-502 11 p.

Research output: Contribution to journalArticle

Microbial fuel cells
Energy harvesting
fuel cell
Genes
Recovery
3 Citations (Scopus)

Active learning of uniformly accurate interatomic potentials for materials simulation

Zhang, L., Lin, D. Y., Wang, H., Car, R. & E, W., Feb 25 2019, In : Physical Review Materials. 3, 2, 023804.

Research output: Contribution to journalArticle

Potential energy surfaces
learning
generators
potential energy
machine learning
4 Citations (Scopus)

Activin-like kinase 5 (ALK5) inactivation in the mouse uterus results in metastatic endometrial carcinoma

Monsivais, D., Peng, J., Kang, Y. & Matzuk, M. M., Feb 26 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 9, p. 3883-3892 10 p.

Research output: Contribution to journalArticle

Open Access
Activins
Transforming Growth Factors
Endometrial Neoplasms
Uterus
Phosphotransferases
1 Citation (Scopus)

A cyanide-bridged di-manganese carbonyl complex that photochemically reduces CO 2 to CO

Kuo, H. Y., Lee, T. S., Chu, A. T., Tignor, S. E., Scholes, G. D. & Bocarsly, A. B., Jan 1 2019, In : Dalton Transactions. 48, 4, p. 1226-1236 11 p.

Research output: Contribution to journalArticle

Cyanides
Carbon Monoxide
Manganese
Electrocatalysts
Photosensitizing Agents

Adaptive etalon suppression technique for long-term stability improvement in high index contrast waveguide-based laser absorption spectrometers

Zhang, E. J., Tombez, L., Teng, C. C., Wysocki, G. & Green, W. M. J., Jul 25 2019, In : Electronics Letters. 55, 15, p. 851-853 3 p.

Research output: Contribution to journalArticle

Spectrometers
Waveguides
Lasers
Sensors
Degrees of freedom (mechanics)
1 Citation (Scopus)

Adaptive Huber Regression

Sun, Q., Zhou, W. X. & Fan, J., Jan 1 2019, In : Journal of the American Statistical Association.

Research output: Contribution to journalArticle

Heavy-tailed Distribution
Robust Estimation
Regression
Robust Inference
Moment

Adaptive measures for mitigating urban heat islands: The potential of thermochromic materials to control roofing energy balance

Fabiani, C., Pisello, A. L., Bou-Zeid, E. R., Yang, J. & Cotana, F., Aug 1 2019, In : Applied Energy. 247, p. 155-170 16 p.

Research output: Contribution to journalArticle

heat island
Energy balance
energy balance
roof
Roofs

Adaptive Remediation with Multi-modal Content

Tu, Y., Brinton, C. G., Lan, A. S. & Chiang, M., Jan 1 2019, Adaptive Instructional Systems - 1st International Conference, AIS 2019, Held as Part of the 21st HCI International Conference, HCII 2019, Proceedings. Sottilare, R. A. & Schwarz, J. (eds.). Springer Verlag, p. 455-468 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11597 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Remediation
Adaptive Systems
Productivity
User Modeling
Linking

Addressing Johnson Graphs, Complete Multipartite Graphs, Odd Cycles, and Random Graphs

Alon, N. M., Cioabă, S. M., Gilbert, B. D., Koolen, J. H. & McKay, B. D., Jan 1 2019, (Accepted/In press) In : Experimental Mathematics.

Research output: Contribution to journalArticle

Complete multipartite Graph
Odd Cycle
Random Graphs
Graph in graph theory
Connected graph
1 Citation (Scopus)

A demand system approach to asset pricing

Koijen, R. S. J. & Yogo, M., Aug 1 2019, In : Journal of Political Economy. 127, 4, p. 1475-1515 41 p.

Research output: Contribution to journalArticle

Demand systems
Asset pricing
Systems approach
Household
Stock market

Adeno-Associated Viral Vectors Containing Alphaherpesvirus Promoter Sequences

Engel, E., Maturana, C., Esteves, A. & Enquist, L., Apr 10 2019

Research output: Innovation

1 Citation (Scopus)

A design for an electromagnetic filter for precision energy measurements at the tritium endpoint

Betti, M. G., Biasotti, M., Boscá, A., Calle, F., Carabe-Lopez, J., Cavoto, G., Chang, C., Chung, W., Cocco, A. G., Colijn, A. P., Conrad, J., D'Ambrosio, N., de Salas, P. F., Faverzani, M., Ferella, A., Ferri, E., Garcia-Abia, P., Gomez-Tejedor, G. G., Gariazzo, S., Gatti, F. & 31 others, Gentile, C., Giachero, A., Gudmundsson, J. E., Hochberg, Y., Kahn, Y., Lisanti, M., Mancini-Terracciano, C., Mangano, G., Marcucci, L. E., Mariani, C., Martínez, J., Messina, M., Molinero-Vela, A., Monticone, E., Nucciotti, A., Pandolfi, F., Pastor, S., Pedrós, J., de los Heros, C. P., Pisanti, O., Polosa, A. D., Puiu, A., Raitses, Y., Rajteri, M., Rossi, N., Santorelli, R., Schaeffner, K., Strid, C. F., Tully, C. G., Zhao, F. & Zurek, K. M., May 1 2019, In : Progress in Particle and Nuclear Physics. 106, p. 120-131 12 p.

Research output: Contribution to journalReview article

tritium
electromagnetism
filters
energy
conservation
1 Citation (Scopus)

A Discrete Set of Possible Transit Ephemerides for Two Long-period Gas Giants Orbiting HIP 41378

Becker, J. C., Vanderburg, A., Rodriguez, J. E., Omohundro, M., Adams, F. C., Stassun, K. G., Yao, X., Hartman, J., Pepper, J., Bakos, G. A., Barentsen, G., Beatty, T. G., Bhatti, W., Chontos, A., Cameron, A. C., Hellier, C., Huber, D., James, D., Kuhn, R. B., Lund, M. B. & 5 others, Pollacco, D., Siverd, R. J., Stevens, D. J., Cardoso, J. V. D. M. & West, R., Jan 1 2019, In : Astronomical Journal. 157, 1, 19.

Research output: Contribution to journalArticle

ephemerides
hot isostatic pressing
transit
planets
planet

A distinct inferential mechanism for delusions in schizophrenia

Baker, S. C., Konova, A. B., Daw, N. D. & Horga, G., Jun 1 2019, In : Brain : a journal of neurology. 142, 6, p. 1797-1812 16 p.

Research output: Contribution to journalArticle

Delusions
Schizophrenia
Psychotic Disorders
Decision Making
Financial Management

A domain-independent text segmentation method for educational course content

Tu, Y., Xiong, Y., Chen, W. & Brinton, C. G., Feb 7 2019, Proceedings - 18th IEEE International Conference on Data Mining Workshops, ICDMW 2018. Tong, H., Zhu, F., Yu, J. & Li, Z. (eds.). IEEE Computer Society, p. 320-327 8 p. 8637380. (IEEE International Conference on Data Mining Workshops, ICDMW; vol. 2018-November).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Education
1 Citation (Scopus)

Adult Neurogenesis, Glia, and the Extracellular Matrix

Cope, E. C. & Gould, E., May 2 2019, In : Cell stem cell. 24, 5, p. 690-705 16 p.

Research output: Contribution to journalReview article

Neurogenesis
Neuroglia
Extracellular Matrix
Neurons
Synapses
1 Citation (Scopus)

Advances in radiated power control at DIII-D

Eldon, D., Kolemen, E., Humphreys, D. A., Hyatt, A. W., Järvinen, A. E., Leonard, A. W., McLean, A. G., Moser, A. L., Petrie, T. W. & Walker, M. L., Jan 1 2019, In : Nuclear Materials and Energy. 18, p. 285-290 6 p.

Research output: Contribution to journalArticle

Power control
Feedback control
Sensors
inoculation
feedback control
1 Citation (Scopus)

Advected glacial seawater preserved in the subsurface of the Maldives carbonate edifice

Blättler, C. L., Higgins, J. A. & Swart, P. K., Jul 15 2019, In : Geochimica et Cosmochimica Acta. 257, p. 80-95 16 p.

Research output: Contribution to journalArticle

Carbonates
Seawater
water mass
seawater
carbonate

AEESP Journal Spotlight: Mid-2019

Deng, B., Masten, S. J., Peters, C. A. & Grasso, D., Jun 1 2019, In : Environmental Engineering Science. 36, 6, 1 p.

Research output: Contribution to journalEditorial