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Ran Lu

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20192025

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  • 17 Article
  • 2 Conference contribution
  • 1 Review article

  • An unsupervised map of excitatory neuron dendritic morphology in the mouse visual cortex

    Weis, M. A., Papadopoulos, S., Hansel, L., Lüddecke, T., Celii, B., Fahey, P. G., Wang, E. Y., Bae, J. A., Bodor, A. L., Brittain, D., Buchanan, J. A., Bumbarger, D. J., Castro, M. A., Collman, F., da Costa, N. M., Dorkenwald, S., Elabbady, L., Halageri, A., Jia, Z. & Jordan, C. & 28 others, Kapner, D., Kemnitz, N., Kinn, S., Lee, K., Li, K., Lu, R., Macrina, T., Mahalingam, G., Mitchell, E., Mondal, S. S., Mu, S., Nehoran, B., Popovych, S., Reid, R. C., Schneider-Mizell, C. M., Seung, H. S., Silversmith, W., Takeno, M., Torres, R., Turner, N. L., Wong, W., Wu, J., Yin, W., Yu, S. C., Reimer, J., Berens, P., Tolias, A. S. & Ecker, A. S., Dec 2025, In: Nature communications. 16, 1, 3361.

    Research output: Contribution to journal › Article › peer-review

    2 Scopus citations

  • CAVE: Connectome Annotation Versioning Engine

    Dorkenwald, S., Schneider-Mizell, C. M., Brittain, D., Halageri, A., Jordan, C., Kemnitz, N., Castro, M. A., Silversmith, W., Maitin-Shephard, J., Troidl, J., Pfister, H., Gillet, V., Xenes, D., Bae, J. A., Bodor, A. L., Buchanan, J. A., Bumbarger, D. J., Elabbady, L., Jia, Z. & Kapner, D. & 22 others, Kinn, S., Lee, K., Li, K., Lu, R., Macrina, T., Mahalingam, G., Mitchell, E., Mondal, S. S., Mu, S., Nehoran, B., Popovych, S., Takeno, M., Torres, R., Turner, N. L., Wong, W., Wu, J., Yin, W., Yu, S. C., Reid, R. C., da Costa, N. M., Seung, H. S. & Collman, F., May 2025, In: Nature Methods. 22, 5, p. 1112-1120 9 p., e2202580119.

    Research output: Contribution to journal › Article › peer-review

    3 Scopus citations

  • Functional connectomics reveals general wiring rule in mouse visual cortex

    Ding, Z., Fahey, P. G., Papadopoulos, S., Wang, E. Y., Celii, B., Papadopoulos, C., Chang, A., Kunin, A. B., Tran, D., Fu, J., Ding, Z., Patel, S., Ntanavara, L., Froebe, R., Ponder, K., Muhammad, T., Bae, J. A., Bodor, A. L., Brittain, D. & Buchanan, J. A. & 43 others, Bumbarger, D. J., Castro, M. A., Cobos, E., Dorkenwald, S., Elabbady, L., Halageri, A., Jia, Z., Jordan, C., Kapner, D., Kemnitz, N., Kinn, S., Lee, K., Li, K., Lu, R., Macrina, T., Mahalingam, G., Mitchell, E., Mondal, S. S., Mu, S., Nehoran, B., Popovych, S., Schneider-Mizell, C. M., Silversmith, W., Takeno, M., Torres, R., Turner, N. L., Wong, W., Wu, J., Yin, W., Yu, S. C., Yatsenko, D., Froudarakis, E., Sinz, F., Josić, K., Rosenbaum, R., Seung, H. S., Collman, F., da Costa, N. M., Reid, R. C., Walker, E. Y., Pitkow, X., Reimer, J. & Tolias, A. S., Apr 10 2025, In: Nature. 640, 8058, p. 459-469 11 p., 4949.

    Research output: Contribution to journal › Article › peer-review

    6 Scopus citations

  • NEURD offers automated proofreading and feature extraction for connectomics

    Celii, B., Papadopoulos, S., Ding, Z., Fahey, P. G., Wang, E., Papadopoulos, C., Kunin, A. B., Patel, S., Bae, J. A., Bodor, A. L., Brittain, D., Buchanan, J. A., Bumbarger, D. J., Castro, M. A., Cobos, E., Dorkenwald, S., Elabbady, L., Halageri, A., Jia, Z. & Jordan, C. & 38 others, Kapner, D., Kemnitz, N., Kinn, S., Lee, K., Li, K., Lu, R., Macrina, T., Mahalingam, G., Mitchell, E., Mondal, S. S., Mu, S., Nehoran, B., Popovych, S., Schneider-Mizell, C. M., Silversmith, W., Takeno, M., Torres, R., Turner, N. L., Wong, W., Wu, J., Yu, S. C., Yin, W., Xenes, D., Kitchell, L. M., Rivlin, P. K., Rose, V. A., Bishop, C. A., Wester, B., Froudarakis, E., Walker, E. Y., Sinz, F., Seung, H. S., Collman, F., da Costa, N. M., Reid, R. C., Pitkow, X., Tolias, A. S. & Reimer, J., Apr 10 2025, In: Nature. 640, 8058, p. 487-496 10 p., 78.

    Research output: Contribution to journal › Article › peer-review

    5 Scopus citations

  • Perisomatic ultrastructure efficiently classifies cells in mouse cortex

    Elabbady, L., Seshamani, S., Mu, S., Mahalingam, G., Schneider-Mizell, C. M., Bodor, A. L., Bae, J. A., Brittain, D., Buchanan, J. A., Bumbarger, D. J., Castro, M. A., Dorkenwald, S., Halageri, A., Jia, Z., Jordan, C., Kapner, D., Kemnitz, N., Kinn, S., Lee, K. & Li, K. & 18 others, Lu, R., Macrina, T., Mitchell, E., Mondal, S. S., Nehoran, B., Popovych, S., Silversmith, W., Takeno, M., Torres, R., Turner, N. L., Wong, W., Wu, J., Yin, W., Yu, S. C., Seung, H. S., Reid, R. C., da Costa, N. M. & Collman, F., Apr 10 2025, In: Nature. 640, 8058, p. 478-486 9 p., 4949.

    Research output: Contribution to journal › Article › peer-review

    6 Scopus citations
View all 20 Research outputs