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Dive into the research topics where Ben Raphael is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Comprehensive and Robust Tools for Analysis of Tumor Heterogeneity and Evolution
9/24/20 → 8/31/25
Project: Research project
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CAREER: Algorithms for Next-Generation Genomics
NSF - National Science Foundation
9/1/16 → 12/31/19
Project: Research project
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Alignment and integration of spatial transcriptomics data
Zeira, R., Land, M., Strzalkowski, A. & Raphael, B. J., May 2022, In: Nature Methods. 19, 5, p. 567-575 9 p.Research output: Contribution to journal › Article › peer-review
8 Scopus citations -
A Maximum Parsimony Principle for Multichromosomal Complex Genome Rearrangements
Simonaitis, P. & Raphael, B. J., Sep 1 2022, 22nd International Workshop on Algorithms in Bioinformatics, WABI 2022. Boucher, C. & Rahmann, S. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 21. (Leibniz International Proceedings in Informatics, LIPIcs; vol. 242).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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A path to translation: How 3D patient tumor avatars enable next generation precision oncology
Shree Bose, Dec 12 2022, In: Cancer Cell. 40, 12, p. 1448-1453 6 p.Research output: Contribution to journal › Comment/debate › peer-review
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Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes (Nature Communications, (2020), 11, 1, (729), 10.1038/s41467-020-14367-0)
PCAWG Drivers and Functional Interpretation Working Group & PCAWG Consortium, Dec 2022, In: Nature communications. 13, 1, 7566.Research output: Contribution to journal › Comment/debate › peer-review
Open Access -
Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations (Nature Communications, (2020), 11, 1, (736), 10.1038/s41467-019-13885-w)
PCAWG Transcriptome Working Group, PCAWG Structural Variation Working Group & PCAWG Consortium, Dec 2022, In: Nature communications. 13, 1, 7572.Research output: Contribution to journal › Comment/debate › peer-review
Open Access