If you made any changes in Pure, your changes will be visible here soon.

Fingerprint Dive into the research topics where Barbara E Engelhardt is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

Genome-Wide Association Study Medicine & Life Sciences
Gene Expression Medicine & Life Sciences
Single Nucleotide Polymorphism Medicine & Life Sciences
Genome Medicine & Life Sciences
Meta-Analysis Medicine & Life Sciences
RNA Sequence Analysis Medicine & Life Sciences
Dextroamphetamine Medicine & Life Sciences
Hydroxymethylglutaryl-CoA Reductase Inhibitors Medicine & Life Sciences

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 2003 2019

3 Citations (Scopus)

Statistical tests for detecting variance effects in quantitative trait studies

Dumitrascu, B., Darnell, G., Ayroles, J. F. & Engelhardt Martin, B., Jan 15 2019, In : Bioinformatics. 35, 2, p. 200-210 11 p.

Research output: Contribution to journalArticle

Statistical tests
Statistical test
Linear Models
Methylation
Bioinformatics

Bayesian nonparametric discovery of isoforms and individual specific quantification

Aguiar, D., Cheng, L. F., Dumitrascu, B., Mordelet, F., Pai, A. A. & Engelhardt Martin, B., Dec 1 2018, In : Nature communications. 9, 1, 1681.

Research output: Contribution to journalArticle

Protein Isoforms
estimates
etiology
splicing
inference
5 Citations (Scopus)

Clustering gene expression time series data using an infinite Gaussian process mixture model

McDowell, I. C., Manandhar, D., Vockley, C. M., Schmid, A. K., Reddy, T. E. & Engelhardt Martin, B., Jan 1 2018, In : PLoS computational biology. 14, 1, e1005896.

Research output: Contribution to journalArticle

Dirichlet Process
Gene Expression Data
Time Series Data
Mixture Model
Gaussian Process
47 Citations (Scopus)

Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics

Barbeira, A. N., Dickinson, S. P., Bonazzola, R., Zheng, J., Wheeler, H. E., Torres, J. M., Torstenson, E. S., Shah, K. P., Garcia, T., Edwards, T. L., Stahl, E. A., Huckins, L. M., Aguet, F., Ardlie, K. G., Cummings, B. B., Gelfand, E. T., Getz, G., Hadley, K., Handsaker, R. E., Huang, K. H. & 225 others, Kashin, S., Karczewski, K. J., Lek, M., Li, X., MacArthur, D. G., Nedzel, J. L., Nguyen, D. T., Noble, M. S., Segrè, A. V., Trowbridge, C. A., Tukiainen, T., Abell, N. S., Balliu, B., Barshir, R., Basha, O., Battle, A., Bogu, G. K., Brown, A., Brown, C. D., Castel, S. E., Chen, L. S., Chiang, C., Conrad, D. F., Damani, F. N., Davis, J. R., Delaneau, O., Dermitzakis, E. T., Engelhardt Martin, B., Eskin, E., Ferreira, P. G., Frésard, L., Gamazon, E. R., Garrido-Martín, D., Gewirtz, A. D. H., Gliner, G., Gloudemans, M. J., Guigo, R., Hall, I. M., Han, B., He, Y., Hormozdiari, F., Howald, C., Jo, B., Kang, E. Y., Kim, Y., Kim-Hellmuth, S., Lappalainen, T., Li, G., Li, X., Liu, B., Mangul, S., McCarthy, M. I., McDowell, I. C., Mohammadi, P., Monlong, J., Montgomery, S. B., Muñoz-Aguirre, M., Ndungu, A. W., Nobel, A. B., Oliva, M., Ongen, H., Palowitch, J. J., Panousis, N., Papasaikas, P., Park, Y. S., Parsana, P., Payne, A. J., Peterson, C. B., Quan, J., Reverter, F., Sabatti, C., Saha, A., Sammeth, M., Scott, A. J., Shabalin, A. A., Sodaei, R., Stephens, M., Stranger, B. E., Strober, B. J., Sul, J. H., Tsang, E. K., Urbut, S., Van De Bunt, M., Wang, G., Wen, X., Wright, F. A., Xi, H. S., Yeger-Lotem, E., Zappala, Z., Zaugg, J. B., Zhou, Y. H., Akey, J., Bates, D., Chan, J., Claussnitzer, M., Demanelis, K., Diegel, M., Doherty, J. A., Feinberg, A. P., Fernando, M. S., Halow, J., Hansen, K. D., Haugen, E., Hickey, P. F., Hou, L., Jasmine, F., Jian, R., Jiang, L., Johnson, A., Kaul, R., Kellis, M., Kibriya, M. G., Lee, K., Li, J. B., Li, Q., Lin, J., Lin, S., Linder, S., Linke, C., Liu, Y., Maurano, M. T., Molinie, B., Nelson, J., Neri, F. J., Park, Y., Pierce, B. L., Rinaldi, N. J., Rizzardi, L. F., Sandstrom, R., Skol, A., Smith, K. S., Snyder, M. P., Stamatoyannopoulos, J., Tang, H., Wang, L., Wang, M., Van Wittenberghe, N., Wu, F., Zhang, R., Nierras, C. R., Branton, P. A., Carithers, L. J., Guan, P., Moore, H. M., Rao, A., Vaught, J. B., Gould, S. E., Lockart, N. C., Martin, C., Struewing, J. P., Volpi, S., Addington, A. M., Koester, S. E., Little, A. R., Brigham, L. E., Hasz, R., Hunter, M., Johns, C., Johnson, M., Kopen, G., Leinweber, W. F., Lonsdale, J. T., McDonald, A., Mestichelli, B., Myer, K., Roe, B., Salvatore, M., Shad, S., Thomas, J. A., Walters, G., Washington, M., Wheeler, J., Bridge, J., Foster, B. A., Gillard, B. M., Karasik, E., Kumar, R., Miklos, M., Moser, M. T., Jewell, S. D., Montroy, R. G., Rohrer, D. C., Valley, D. R., Davis, D. A., Mash, D. C., Undale, A. H., Smith, A. M., Tabor, D. E., Roche, N. V., McLean, J. A., Vatanian, N., Robinson, K. L., Sobin, L., Barcus, M. E., Valentino, K. M., Qi, L., Hunter, S., Hariharan, P., Singh, S., Um, K. S., Matose, T., Tomaszewski, M. M., Barker, L. K., Mosavel, M., Siminoff, L. A., Traino, H. M., Flicek, P., Juettemann, T., Ruffier, M., Sheppard, D., Taylor, K., Trevanion, S. J., Zerbino, D. R., Craft, B., Goldman, M., Haeussler, M., Kent, W. J., Lee, C. M., Paten, B., Rosenbloom, K. R., Vivian, J., Zhu, J., Nicolae, D. L., Cox, N. J. & Im, H. K., Dec 1 2018, In : Nature communications. 9, 1, 1825.

Research output: Contribution to journalArticle

phenotype
gene expression
Genome-Wide Association Study
Gene expression
Genes

Fast Moment Estimation for Generalized Latent Dirichlet Models

Zhao, S., Engelhardt Martin, B., Mukherjee, S. & Dunson, D. B., Oct 2 2018, In : Journal of the American Statistical Association. 113, 524, p. 1528-1540 13 p.

Research output: Contribution to journalArticle

Moment Estimation
Dirichlet
Parameter Estimation
Generalized Method of Moments
Moment Conditions