Research output per year
Research output per year
- 1,700 - 1,750 out of 2,508 results
Search results
-
2010
It's all about the talent.
Tilghman, S. M., Nov 2010, In: Molecular biology of the cell. 21, 22, p. 3823 1 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Laminar flow around corners triggers the formation of biofilm streamers
Rusconi, R., Lecuyer, S., Guglielmini, L. & Stone, H. A., Sep 6 2010, In: Journal of the Royal Society Interface. 7, 50, p. 1293-1299 7 p.Research output: Contribution to journal › Article › peer-review
Open Access170 Scopus citations -
Limits of sensing temporal concentration changes by single cells
Mora, T. & Wingreen, N. S., Jun 14 2010, In: Physical review letters. 104, 24, 248101.Research output: Contribution to journal › Article › peer-review
Open Access68 Scopus citations -
MAPK Substrate Competition Integrates Patterning Signals in the Drosophila Embryo
Kim, Y., Coppey, M., Grossman, R., Ajuria, L., Jiménez, G., Paroush, Z. & Shvartsman, S. Y., Mar 9 2010, In: Current Biology. 20, 5, p. 446-451 6 p.Research output: Contribution to journal › Article › peer-review
Open Access68 Scopus citations -
Mapping dynamic histone acetylation patterns to gene expression in nanog-depleted murine embryonic stem cells
Markowetz, F., Mulder, K. W., Airoldi, E. M., Lemischka, I. R. & Troyanskaya, O. G., Dec 2010, In: PLoS computational biology. 6, 12, e1001034.Research output: Contribution to journal › Article › peer-review
Open Access19 Scopus citations -
Mass spectrometry-based metabolomics of yeast
Crutchfield, C. A., Lu, W., Melamud, E. & Rabinowitz, J. D., 2010, In: Methods in enzymology. 470, C, p. 393-426 34 p.Research output: Contribution to journal › Article › peer-review
47 Scopus citations -
Maximum entropy models for antibody diversity
Mora, T., Walczak, A. M., Bialek, W. & Callan, C. G., Mar 23 2010, In: Proceedings of the National Academy of Sciences of the United States of America. 107, 12, p. 5405-5410 6 p.Research output: Contribution to journal › Article › peer-review
Open Access245 Scopus citations -
Measurement of the copy number of the master quorum-sensing regulator of a bacterial cell
Teng, S. W., Wang, Y., Tu, K. C., Long, T., Mehta, P., Wingreen, N. S., Bassler, B. L. & Ong, N. P., May 5 2010, In: Biophysical Journal. 98, 9, p. 2024-2031 8 p.Research output: Contribution to journal › Article › peer-review
Open Access42 Scopus citations -
Measuring the bending stiffness of bacterial cells using an optical trap
Wang, S., Arellano-Santoyo, H., Combs, P. A. & Shaevitz, J. W., Apr 2010, In: Journal of Visualized Experiments. 38, e2012.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Metabolomic analysis and visualization engine for LC - MS data
Melamud, E., Vastag, L. & Rabinowitz, J. D., Dec 1 2010, In: Analytical Chemistry. 82, 23, p. 9818-9826 9 p.Research output: Contribution to journal › Article › peer-review
Open Access453 Scopus citations -
Metabolomic analysis via reversed-phase ion-pairing liquid chromatography coupled to a stand alone orbitrap mass spectrometer
Lu, W., Clasquin, M. F., Melamud, E., Amador-Noguez, D., Caudy, A. A. & Rabinowitz, J. D., Apr 15 2010, In: Analytical Chemistry. 82, 8, p. 3212-3221 10 p.Research output: Contribution to journal › Article › peer-review
Open Access402 Scopus citations -
Metabolomic changes accompanying transformation and acquisition of metastatic potential in a syngeneic mouse mammary tumor model
Lu, X., Bennet, B., Mu, E., Rabinowitz, J. & Kang, Y., Mar 26 2010, In: Journal of Biological Chemistry. 285, 13, p. 9317-9321 5 p.Research output: Contribution to journal › Article › peer-review
Open Access87 Scopus citations -
Microfluidic generation of a high volume fraction of bubbles in droplets
Wan, J. & Stone, H. A., Oct 7 2010, In: Soft matter. 6, 19, p. 4677-4680 4 p.Research output: Contribution to journal › Article › peer-review
22 Scopus citations -
Modeling the role of covalent enzyme modification in Escherichia coli nitrogen metabolism
Kidd, P. B. & Wingreen, N. S., 2010, In: Physical Biology. 7, 1, 016006.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Multiscale modeling of diffusion in the early Drosophila embryo
Sample, C. & Shvartsman, S. Y., Jun 1 2010, In: Proceedings of the National Academy of Sciences of the United States of America. 107, 22, p. 10092-10096 5 p.Research output: Contribution to journal › Article › peer-review
Open Access31 Scopus citations -
Nearby boundaries create eddies near microscopic filter feeders
Pepper, R. E., Roper, M., Ryu, S., Matsudaira, P. & Stone, H. A., May 6 2010, In: Journal of the Royal Society Interface. 7, 46, p. 851-862 12 p.Research output: Contribution to journal › Article › peer-review
Open Access45 Scopus citations -
Negative Feedback Loops Involving Small Regulatory RNAs Precisely Control the Vibrio harveyi Quorum-Sensing Response
Tu, K. C., Long, T., Svenningsen, S. L., Wingreen, N. S. & Bassler, B. L., Feb 26 2010, In: Molecular Cell. 37, 4, p. 567-579 13 p.Research output: Contribution to journal › Article › peer-review
Open Access101 Scopus citations -
Newtonian pizza: Spinning a viscous sheet
Howell, P. D., Scheid, B. & Stone, H. A., Sep 2010, In: Journal of Fluid Mechanics. 659, p. 1-23 23 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Optimizing information flow in small genetic networks. II. Feed-forward interactions
Walczak, A. M., Tkačik, G. & Bialek, W., Apr 6 2010, In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 81, 4, 041905.Research output: Contribution to journal › Article › peer-review
Open Access81 Scopus citations -
Particle/fluid interface replication as a means of producing topographically patterned polydimethylsiloxane surfaces for deposition of lipid bilayers
Subramaniam, A. B., Lecuyer, S., Ramamurthi, K. S., Losick, R. & Stone, H. A., May 18 2010, In: Advanced Materials. 22, 19, p. 2142-2147 6 p.Research output: Contribution to journal › Article › peer-review
Open Access39 Scopus citations -
Precision and kinetics of adaptation in bacterial chemotaxis
Meir, Y., Jakovljevic, V., Oleksiuk, O., Sourjik, V. & Wingreen, N. S., Nov 3 2010, In: Biophysical Journal. 99, 9, p. 2766-2774 9 p.Research output: Contribution to journal › Article › peer-review
Open Access34 Scopus citations -
Probing bacterial transmembrane histidine kinase receptor-ligand interactions with natural and synthetic molecules
Ng, W. L., Wei, Y., Perez, L. J., Cong, J., Long, T., Koch, M., Semmelhack, M. F., Wingreen, N. S. & Bassler, B. L., Mar 23 2010, In: Proceedings of the National Academy of Sciences of the United States of America. 107, 12, p. 5575-5580 6 p.Research output: Contribution to journal › Article › peer-review
Open Access51 Scopus citations -
Quantitative analysis of fitness and genetic interactions in yeast on a genome scale
Baryshnikova, A., Costanzo, M., Kim, Y., Ding, H., Koh, J., Toufighi, K., Youn, J. Y., Ou, J., San Luis, B. J., Bandyopadhyay, S., Hibbs, M., Hess, D., Gingras, A. C., Bader, G. D., Troyanskaya, O. G., Brown, G. W., Andrews, B., Boone, C. & Myers, C. L., Dec 2010, In: Nature Methods. 7, 12, p. 1017-1024 8 p.Research output: Contribution to journal › Article › peer-review
Open Access265 Scopus citations -
Quiescent fibroblasts exhibit high metabolic activity
Lemons, J. M. S., Coller, H. A., Feng, X. J., Bennett, B. D., Legesse-Miller, A., Johnson, E. L., Raitman, I., Pollina, E. A., Rabitz, H. A. & Rabinowitz, J. D., Oct 2010, In: PLoS biology. 8, 10, e1000514.Research output: Contribution to journal › Article › peer-review
Open Access306 Scopus citations -
Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli
Goodarzi, H., Bennett, B. D., Amini, S., Reaves, M. L., Hottes, A. K., Rabinowitz, J. D. & Tavazoie, S., 2010, In: Molecular Systems Biology. 6, 378.Research output: Contribution to journal › Article › peer-review
Open Access135 Scopus citations -
Resolving the Composition of Protein Complexes Using a MALDI LTQ Orbitrap
Luo, Y., Li, T., Yu, F., Kramer, T. & Cristea, I. M., Jan 2010, In: Journal of the American Society for Mass Spectrometry. 21, 1, p. 34-46 13 p.Research output: Contribution to journal › Article › peer-review
Open Access31 Scopus citations -
Simultaneous genome-wide inference of physical, genetic, regulatory, and functional pathway components
Park, C. Y., Hess, D. C., Huttenhower, C. & Troyanskaya, O. G., Nov 2010, In: PLoS computational biology. 6, 11, e1001009.Research output: Contribution to journal › Article › peer-review
Open Access21 Scopus citations -
Specific control of Pseudomonas aeruginosa surface-associated behaviors by two c-di-GMP diguanylate cyclases
Merritt, J. H., Ha, D. G., Cowles, K. N., Lu, W., Morales, D. K., Rabinowitz, J. D., Gitai, Z. & O'Toole, G. A., 2010, In: mBio. 1, 4, e00183-10.Research output: Contribution to journal › Article › peer-review
Open Access143 Scopus citations -
SPICi: A fast clustering algorithm for large biological networks
Jiang, P. & Singh, M., Feb 24 2010, In: Bioinformatics. 26, 8, p. 1105-1111 7 p., btq078.Research output: Contribution to journal › Article › peer-review
Open Access190 Scopus citations -
Statistical mechanics of letters in words
Stephens, G. J. & Bialek, W., Jun 25 2010, In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 81, 6, 066119.Research output: Contribution to journal › Article › peer-review
Open Access41 Scopus citations -
Supervised normalization of microarrays
Mecham, B. H., Nelson, P. S. & Storey, J. D., Mar 31 2010, In: Bioinformatics. 26, 10, p. 1308-1315 8 p., btq118.Research output: Contribution to journal › Article › peer-review
Open Access93 Scopus citations -
Surface association and the MreB cytoskeleton regulate pilus production, localization and function in Pseudomonas aeruginosa
Cowles, K. N. & Gitai, Z., Jun 2010, In: Molecular Microbiology. 76, 6, p. 1411-1426 16 p.Research output: Contribution to journal › Article › peer-review
Open Access82 Scopus citations -
Surface-tension-induced synthesis of complex particles using confined polymeric fluids
Choi, C. H., Lee, J., Yoon, K., Tripathi, A., Stone, H. A., Weitz, D. A. & Lee, C. S., Oct 11 2010, In: Angewandte Chemie - International Edition. 49, 42, p. 7748-7752 5 p.Research output: Contribution to journal › Article › peer-review
55 Scopus citations -
Systematic planning of genome-scale experiments in poorly studied species
Guan, Y., Dunham, M., Caudy, A. & Troyanskaya, O., Mar 2010, In: PLoS computational biology. 6, 3Research output: Contribution to journal › Article › peer-review
Open Access20 Scopus citations -
Systems-level metabolic flux profiling elucidates a complete, bifurcated tricarboxylic acid cycle in Clostridium acetobutylicum
Amador-Noguez, D., Feng, X. J., Fan, J., Roquet, N., Rabitz, H. A. & Rabinowitz, J. D., Sep 2010, In: Journal of bacteriology. 192, 17, p. 4452-4461 10 p.Research output: Contribution to journal › Article › peer-review
Open Access106 Scopus citations -
Tensions divide
Martin, A. C. & Wieschaus, E. F., Jan 2010, In: Nature cell biology. 12, 1, p. 5-7 3 p.Research output: Contribution to journal › Article › peer-review
18 Scopus citations -
TGF-β and Insulin Signaling Regulate Reproductive Aging via Oocyte and Germline Quality Maintenance
Luo, S., Kleemann, G. A., Ashraf, J. M., Shaw, W. M. & Murphy, C. T., Oct 15 2010, In: Cell. 143, 2, p. 299-312 14 p.Research output: Contribution to journal › Article › peer-review
Open Access188 Scopus citations -
The Bicoid gradient is shaped independently of nuclei
Grimm, O. & Wieschaus, E., Sep 1 2010, In: Development. 137, 17, p. 2857-2862 6 p.Research output: Contribution to journal › Article › peer-review
Open Access31 Scopus citations -
The Common Feature of Leukemia-Associated IDH1 and IDH2 Mutations Is a Neomorphic Enzyme Activity Converting α-Ketoglutarate to 2-Hydroxyglutarate
Ward, P. S., Patel, J., Wise, D. R., Abdel-Wahab, O., Bennett, B. D., Coller, H. A., Cross, J. R., Fantin, V. R., Hedvat, C. V., Perl, A. E., Rabinowitz, J. D., Carroll, M., Su, S. M., Sharp, K. A., Levine, R. L. & Thompson, C. B., Mar 16 2010, In: Cancer Cell. 17, 3, p. 225-234 10 p.Research output: Contribution to journal › Article › peer-review
Open Access1693 Scopus citations -
The cytoskeleton: I-beams of the cell
Shaevitz, J. & Nørrelykke, S., 2010, Physics Today, 63, 2, p. 60-61 2 p.Research output: Contribution to specialist publication › Article
1 Scopus citations -
The dynamic behavior of chemically "stiffened" red blood cells in microchannel flows
Forsyth, A. M., Wan, J., Ristenpart, W. D. & Stone, H. A., Jul 2010, In: Microvascular Research. 80, 1, p. 37-43 7 p.Research output: Contribution to journal › Article › peer-review
134 Scopus citations -
The genetic landscape of a cell
Costanzo, M., Baryshnikova, A., Bellay, J., Kim, Y., Spear, E. D., Sevier, C. S., Ding, H., Koh, J. L. Y., Toufighi, K., Mostafavi, S., Prinz, J., St. Onge, R. P., Vandersluis, B., Makhnevych, T., Vizeacoumar, F. J., Alizadeh, S., Bahr, S., Brost, R. L., Chen, Y. & Cokol, M. & 33 others, , Jan 22 2010, In: Science. 327, 5964, p. 425-431 7 p.Research output: Contribution to journal › Article › peer-review
Open Access1708 Scopus citations -
The hexosamine biosynthetic pathway couples growth factor-induced glutamine uptake to glucose metabolism
Wellen, K. E., Lu, C., Mancuso, A., Lemons, J. M. S., Ryczko, M., Dennis, J. W., Rabinowitz, J. D., Coller, H. A. & Thompson, C. B., Dec 15 2010, In: Genes and Development. 24, 24, p. 2784-2799 16 p.Research output: Contribution to journal › Article › peer-review
Open Access311 Scopus citations -
The metabolic enzyme CTP synthase forms cytoskeletal filaments
Ingerson-Mahar, M., Briegel, A., Werner, J. N., Jensen, G. J. & Gitai, Z., Aug 2010, In: Nature cell biology. 12, 8, p. 739-746 8 p.Research output: Contribution to journal › Article › peer-review
Open Access224 Scopus citations -
The onset of collective behavior in social amoebae
Gregor, T., Fujimoto, K., Masaki, N. & Sawai, S., May 21 2010, In: Science. 328, 5981, p. 1021-1025 5 p.Research output: Contribution to journal › Article › peer-review
Open Access257 Scopus citations -
The response regulator SprE (RssB) is required for maintaining poly(A) polymerase I-degradosome association during stationary phase
Carabetta, V. J., Silhavy, T. J. & Cristea, I. M., Jul 2010, In: Journal of bacteriology. 192, 14, p. 3713-3721 9 p.Research output: Contribution to journal › Article › peer-review
Open Access42 Scopus citations -
Thermocapillary-assisted pulling of thin films: Application to molten metals
Scheid, B., Van Nierop, E. A. & Stone, H. A., Oct 25 2010, In: Applied Physics Letters. 97, 17, 171906.Research output: Contribution to journal › Article › peer-review
7 Scopus citations -
Thermophoresis: Microfluidics characterization and separation
Vigolo, D., Rusconi, R., Stone, H. A. & Piazza, R., Aug 7 2010, In: Soft matter. 6, 15, p. 3489-3493 5 p.Research output: Contribution to journal › Article › peer-review
121 Scopus citations -
The role of surface rheology in liquid film formation
Scheid, B., Delacotte, J., Dollet, B., Rio, E., Restagno, F., Van Nierop, E. A., Cantat, I., Langevin, D. & Stone, H. A., 2010, In: EPL. 90, 2, 24002.Research output: Contribution to journal › Article › peer-review
63 Scopus citations -
The Science of Pizza: The Molecular Origins of Cheese, Bread, and Digestion Using Interactive Activities for the General Public
Rowat, A. C., Rosenberg, D., Hollar, K. A. & Stone, H. A., Sep 2010, In: Journal of Food Science Education. 9, 4, p. 106-112 7 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations